PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma121g00370.1
Common NameZOSMA_121G00370
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 127aa    MW: 14586.8 Da    PI: 9.8709
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma121g00370.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.5e-0528671155
                      HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      rR  ++ +++  L +l+ +      +K + a++L +A+++Ik++q
  Zosma121g00370.1 28 RRNTKLGDRITSLHQLVSPF-----GKTDTASVLSEAINHIKDMQ 67
                      67778889999999999998.....8*****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.57E-41571No hitNo description
SuperFamilySSF474591.14E-101583IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-81577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.4331766IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MINDDPYHIQ NNMRSKRRKM MTESIAIRRN TKLGDRITSL HQLVSPFGKT DTASVLSEAI  60
NHIKDMQEKI EFLTMPYMRH KLYSYNLFRG RDERIGLKNS GLCVVPITYV LENNIGEIVG  120
SSSYFS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9SFZ35e-20BH110_ARATH; Transcription factor bHLH110
TrEMBLA0A0K9Q0Q32e-90A0A0K9Q0Q3_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5272812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-21bHLH family protein